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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906418.1_cds_XP_016456581.1_50402
CDS Infomation

[gene=LOC107780543] [db_xref=GeneID:107780543] [protein=probable sodium/metabolite cotransporter BASS1, chloroplastic] [protein_id=XP_016456581.1] [location=join(151167..151688,153221..153314,153390..153423,153527..153581,154616..154699,154786..155073,155329..155481)] [gbkey=CDS]
Sequence

ATGCAGGCGTTTCTATCAACACCAAATACTGCAAAAACCTGTTACTTCAATCACACAAGA
TTTATACACAACAATCAATATCTCACCTCTAGAAATCTCCCTTTGCCCTTTTCACCATCC
CCTAAATCACTTCACTTCTCAAACTCCCATTCACCAATTCTTGTTTTGAATCAAAAACCC
AAACCCATTTCACAAACATCCAGGACAATAAGTGTGCCCCTTCTGTGTGCAAATTCGTCA
AATGCCATTACTGCAGATGATAATAACAGCAAGAAAAGCTTCGGGGATTGGATCCAAACT
GTTGGGGAGGCCATTTCTGTCTTGTTTCCTTTATGGGTAGCTTTGGGTTGCTTAATTGGG
CTGTTCAAACCCAACTCCTATAATTGGGTCAAACCCCAATGGACCGTGATGGGTATTACA
CTTACAATGCTTGGCATGGGAATGACTCTTACTTTTGATGACCTTCGTTCTGCTTTAGCT
ATGCCTAAACAGTTATTCTGCGGTTTCGTCCTTCAGTACTCGGTGATGCCTTTATCAGGT
TATTTTGTTAGTAAGCTGTTAAATTTGCCATCCCATTATGCAGCAGGCTTGATTTTGGTT
GGCTGCTGTCCTGGAGGGACGGCAAGTAACATTGTCACTTACATTGCACGTGGAAATGTG
GCGCTTTCAGTATTGATGACTGCTGCAAGCACCCTATCTGCCGTGGTGATGACCCCTTTC
CTAACAGAGAAACTTGCAGGGCAATTTGTTGCAGTGGATGCAGCTGGACTTTTCATGTCC
ACTTTACAGGTGGTGCTTCTTCCTGTCTTAGCTGGTGCATTTCTGAATCAGTATTTCAAA
AGCCTTGTCAAAGTTGTGTCTCCATTGATGCCCCCTATTGCTGTAGCAACTGTTGCAGTT
CTTTGTGGAAATGCAATTGCGCAGAGTTCTTCTGCAATCCTCATGTCAGGTCAACAGGTT
GTCTTAGCTGCTGCTCTTCTTCATGCATCTGGTTTCTTCTTTGGCTATGTGCTCTCAAGG
ATGCTCGGGGTTGATGTATCATCCTCAAGGACAATATCTATTGAAGTCGGCATGCAGAAC
TCGGTTCTTGGAGTAGTTCTAGCCACTCAGCACTTTGGTAATCCGCTTACTGCAGTACCA
TGTGCGGTTTCTAGTGTTTGTCACTCAATATTTGGCAGTGCCTTGGCTGGTATCTGGAGG
TGTTCTGTTCCAGATCAAGTGCAGCAGTGA

Peptide Sequence

PEP ID

XP_016456581.1
PEP Infomation

PREDICTED: probable sodium/metabolite cotransporter BASS1, chloroplastic [Nicotiana tabacum]
Sequence

MQAFLSTPNTAKTCYFNHTRFIHNNQYLTSRNLPLPFSPSPKSLHFSNSHSPILVLNQKP
KPISQTSRTISVPLLCANSSNAITADDNNSKKSFGDWIQTVGEAISVLFPLWVALGCLIG
LFKPNSYNWVKPQWTVMGITLTMLGMGMTLTFDDLRSALAMPKQLFCGFVLQYSVMPLSG
YFVSKLLNLPSHYAAGLILVGCCPGGTASNIVTYIARGNVALSVLMTAASTLSAVVMTPF
LTEKLAGQFVAVDAAGLFMSTLQVVLLPVLAGAFLNQYFKSLVKVVSPLMPPIAVATVAV
LCGNAIAQSSSAILMSGQQVVLAAALLHASGFFFGYVLSRMLGVDVSSSRTISIEVGMQN
SVLGVVLATQHFGNPLTAVPCAVSSVCHSIFGSALAGIWRCSVPDQVQQ

Transcript Sequence

Gene sequence data has not been registered.